Synthesis, Characterization of Microwave assisted Novel functionalized Pyrimido pyrimidine– tethered to benzothiazole Derivative and their Pharmacological Screening


Priti V. Patel, Sarika P. Patel*and Keyur Bhatt

Department of Chemistry, Ganpat University, Kherva, Mehsana, Gujarat, India.

Corresponding Author: Email: spp04@ganpatuniversity.ac.in

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ABSTRACT:

There is a constant need to synthesise new and desired compounds.  The current study focusses on the two-step, microwave-assisted three-component synthesis of new lead compounds, specifically 5-phenyl-3,5-dihydro-4H-benzothiazolo[3,2-a] pyrimido[4,5-d] pyrimidinone. Target molecules   were   verified   using   a   variety   of   spectral   techniques   for analysis, such as Mass, IR, 1H and 13C NMR spectrometry. The   synthetic   derivatives' antimicrobial abilities were measured. The Broth Dilutionmethod was utilised to measure their minimum inhibitory concentration activity against both Gram-negative as well as Gram-positive bacteria and fungi. There are several advantages to this protocol.  outstanding yields, a quick reaction,simple workup, and no need for column chromatography. Both traditional methods and microwave-assisted irradiation were used to establish the mentioned reactions.

KEYWORDS:

Amino benzothiazole; Benzothiazolo-pyridopyrimidine; Biological exertion; Fused Pyrimido-benzothiazole; Microwave-assisted technique

Introduction

Heterocyclic compounds are the cyclic compounds which contain one or more different elements (such as nitrogen, oxygen, sulphur, phosphorus, silicon and selenium) other than carbon in their ring structure. Heterocyclic elements have an important role in our everyday existence. Heterocycles include the vast majority of biologically active agrochemicals and pharmaceuticals.In nature, they  are  widely  dispersed. Heterocyclic ring systems are found in a  wide  range  of  substances,  including  alkaloids,  antibiotics,  vitamins,  essential amino  acids,  haemoglobin,  hormones,  chlorophyll,  and  many  synthetic  medications  and  dyes.Because of their  unique  chemical  reactivity   and  ability to act as easy convenient  structures for adding physiologically  active  substituents,  heterocyclic   compounds are   highly  suitable  for  use  as  pharmaceuticals.Because  of  their  many  pharmacophoric  qualities,  including  antimicrobial,  antifungal,  anti-malarial,  anti-inflammatory,  antiviral,  and  anticancer  effects,  among  many  others,  heterocyclic  compounds  with  nitrogen and  sulphur  atoms  are  crucial  in  the  field  of  pharmaceutical  chemistry.  The  advent  of  combinatorial  or “library”  techniques  transformed  the  process  of  developing  new  leads  for  drug  design  and  structure  function relationship   studies. “The  developer  of  green  chemistry  covers  the  need  for  innovations  in  chemical  manufacturing  to  advance  a  sustainable  future”.1 According to  the  literature,  a  lot  of  researchers  have recently  employed  the  MCR  strategy  to  synthesise  various  benzothiazole[3,2-a] pyrimidines. In light of these attributes, the design and synthesis of novel hybrid molecules incorporating both pyrimido[4,5-d]pyrimidine and benzothiazole cores offer a promising strategy for the development of potent therapeutic agents. The fusion of these two pharmacophores is expected to result in synergistic effects, potentially leading to enhanced efficacy and target specificity. This study focuses on the synthesis and characterization of a novel functionalized pyrimido[4,5-d]pyrimidine tethered to a benzothiazole derivative, aiming to explore its structural features and evaluate its potential for further biological investigations. There  have  been studies on  multicomponent  reactions  that  involve  aldehydes,  2-amino-benzothiazole, and  β-keto  ester  using several  kinds  of  catalysts,  including  PdCl2,  nano-Fe3O4@SiO2-TiCl3,  Fe3O4/cellulose/Cu (II),  Fe3O4/nano-kaolin/Ti4+,  Fe3O4/nano  cellulose/ BF3,  FeFe3  and  AlCl3.2-8 thiazolo [3,2-a] pyrimidine  was  synthesised using  a  microwave  method  that  was  reported  under  clean  conditions.  The  method  of  column  chromatography was  used  to  purify  the  resultant  compounds,  but  less  than  90  percent  of  the  desired  products  were  obtained.9 Even  so,  appropriate  sustainable  and  environmentally  friendly  procedures  are  still  needed  for pyrimido[4,5-d] pyrimidinone  tethered  benzothiazole  derivatives  under  green  conditions.  This  could  be  the cause  of  the  lower  number  of  side  products  that  are  frequently  produced  by  reactions  carried  out  using microwave  irradiation  at  an  optimal  reaction  temperature  as  opposed  to  reaction  when  heated  conventionally, during  which  the  reaction  temperature  is  frequently  suboptimal.10-13

In  pursuit  of  green  methodologies,  Inspired  by  the  results  of  the  previously  published  study.14-15 Here,  we  describe  the  application  of  a  microwave-assisted  method  to  create  new  derivatives  of  several functionalised  benzothiazole[3,2-a] pyrimidines  through  a  reaction  between  malononitrile  and  2-amino-benzothiazole  with  various   aldehyde  using  ammonium  acetate  as  an  efficient  catalyst  in  methanol  solvent under  microwave  assisted  and  This  paper  presents  a  rapid  and  effective  response  of  various  benzothiazole[3,2-a] pyrimidines  derivative  with  formic  acid for  the  synthesis  of  5-phenyl-3,5-dihydro-4H-benzothiazolo[3,2-a] pyrimido[4,5-d] pyrimidinone  derivatives with sulphuric  acid  catalysed   significantly improved output and  a  quick  reaction  time  is  presented  in  order  to  create  novel  structural  motifs  with  encouraging  bioactivity.

Result And Discussion

In  Step  1  of  our  study,  we  screened  for  the  presence  and  absence  of  various  catalysts  in  the designs  reaction  that  involved  benzaldehyde(1a),  malononitrile(2),  and  2-aminobenzothaizole(3).  Spectral analysis  using  1H NMR  and 13C NMR  validated  each  screening  procedures.  We  found  that  36%  of  the  end result  was  within  60  minutes  during  the  reflux  temperature  without  the  use  of  any  catalyst,  based   on   examining  results (Entry 1 in Table 1).  The above-described reaction is carried via one step.i.e.  In the  reaction  of  1a  and  2,  benzylidene  malononitrile  was  not  separated.  However, the  addition  of  3  resulted  in the  creation  of  an  intermediary  at  room  temperature  that  was  subsequently  microwave-exposed,  producing  product  4a.  It  indicated  how  2-amino  benzothiazole  its  own  behaved  as  a  catalyst  in   the  Knoevenagel condensation  of  malononitrile  and  benzaldehyde.  Therefore,  we  experimented  with  various  catalysts  to  boost the  yield,  and  the  outcomes  are  shown  in  Table 1  and  observed  that a 53%  yield  was  generated  when  Et3N was  used  for  a  catalyst  output  at  10 and  20 mol%  (Entry 2 and 3 in Table 1). improving the catalyst’s amount had no  impact on  the  output  of  4a.  After that, using various salts of ammonium as a catalyst (they are listed entry 4-8 in Table 1), we were able to produce 59% yield of ammonium acetate in 30 minutes at irradiated microwave.  The use of ammonium acetate 30 mol% generated the most effective outcomes achieved (number of 11 in Table 1), yielding an amazing 89% of the end result within only eight minuteswe looked into various solvent for the chemical process (Entries 1–7 in Table 2) and discovered overall, Ethanol was the best fluid for solvents because the end result residue split while heated and there was no need for further purifying beyond washing it with hot ethanol.  While the reaction did not proceed with water (Entries 1 in Table 2), After cooling, under reaction with methanol, n-propanol, n-butanol and DCM (dichloromethane)(Entries 2,4,5 and 6 in Table 2), the end result residue became separated, with very low yields of 27%, 26% ,16%, and 53% respectively Table 2 shows the findings of our additional investigation into the range and versatility of aromatic aldehydes compounds in this multicomponent reaction.  TLC showed that the reaction was finished while the solution of THF and DMSO were employed as solvents, however even after cooling, the result remained undifferentiated.  This might be because, under ideal reaction conditions, such as the reaction of Compounds 1 and 2 at room temperature with ethanol as the solvent and 30 mol% catalyst were very soluble in these solvents. Compound 3 was then added, and the mixture was refluxed or microwave-irradiated during the necessary amount of time, the products were highly soluble in these solvents.

lately we have focused on synthesising specific heterocyclic compounds with expected biological activity under microwave-assisted conditions that are both environmentally friendly and time-efficient.16 The originally characterised compounds 4a–l, 5a–l were re-synthesised using microwave stimulation in order to improve reaction yields and shorten reaction times.  Reaction yields were enhanced by 15–25% as opposed to the traditional approaches, and reaction durations significantly shortened, according to the findings for both MW-assisted and Conventional processes, which appear in Table 3.

Table 1: Screening of the catalyst for the model reactiona.  (step-1)

Entry

(MW irradiation) Conditions
Catalyst Amount mol% of Catalyst Solvent Time

(min)

Yield

(%)

1

Ethanol 60 36
2 Et3N 10 Ethanol 60

53

3

Et3N 20 Ethanol 60 53
4 (NH4)2CO3 20 Ethanol 30

38

5

NH4Cl 20 Ethanol 120 no reaction
6 (NH4)2SO4 20 Ethanol 120

no reaction

7

AcOH 20 Ethanol 120 no reaction
8 NH4OAc 10 Ethanol 30

59

9

NH4OAc 20 Ethanol 25 68
10 NH4OAc 25 Ethanol 20

76

11

NH4OAc 30 Ethanol 8 89
12 NH4OAc 35 Ethanol 8

89

Table 2:  Solvent screening for the model reactiona. (Step-1)

Entry

                        Conditions Yield (%)
Solvent

Time(min)

1

Water 35 no reaction
2 Methanol 30

27

3

Ethanol 4 89
4 n-Propanol 38

26

5

n-Butanol 35 16
6 DCM 12

53

7

Ethanol: Water (1:1) 30

68

a Reaction conditions: Catalyst (30 mol% NH4OAc), 1a-l (5 mmol), 2 (5 mmol), 5 mL of solvent swirled at room temperature, following the addition of 3 (5 mmol) dissolved in five millilitres of solvent and  microwave-irradiated.

Table 3: Evaluation of the Efficiency of Conventional and Microwave (MW) Processes of the Production of Pyrimidine and Pyrimidine-Pyrimidine Derivatives 4a-l, 5a-l.

Compound

MW irradiation Method A

% of Yield                    Time (min)

Conventional Condition Method B

% of Yield              Time (hour)

4a

89 4 73 2
4b 89 4 75

2.5

4c

90 4 75 3
4d 88 5 70

3

4e

89 5 70 3
4f 90 5 70

3

4g

89 4 71 3
4h 87 5 70

3

4i

88 4 78 3
4j 89 5 77

4

4k

87 5 72 3
4l 86 5 75

3.5

5a

87 9 71 8
5b 82
Article Publishing History
Received on: 25 Jun 2025
Accepted on: 25 Nov 2025

Article Review Details
Reviewed by: Dr. Aditiya Chaturvedi
Second Review by: Dr. Mohan Tewari
Final Approval by: Dr. Murat Hatipoğlu


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